- Install Rust
- Install AminoGraph via cargo install aminograph
- Run AminoGraph via aminograph aligned-fasta.fa output-directory
Once the tool has run, it will place outputs in the specified output directory. These outputs include:
- report.html An interactive HTML file that allows investigating the inferred graph.
- stats.json A JSON file providing machine readable statistics on the inferred graph.
- graph.json A JSON file providing a machine readable version of the graph